Thioamides as Fluorescence-Quenching Probes

On the use of thioamides as fluorescence quenching probes for tracking protein folding and stability.

Our laboratory has developed thioamide analogs of the natural amino acids as minimally-perturbing fluorescence quenching probes that can be placed at many locations in a protein sequence. We have shown that the mechanism of quenching can be either Förster resonance energy transfer (FRET) or photoinduced electron transfer (PET), depending on the identity of the donor fluorophore. Furthermore, we...

Flavonoids as mushroom tyrosinase inhibitors: a fluorescence quenching study.

Flavonoids, a group of naturally occurring antioxidants and metal chelators, can be used as tyrosinase inhibitors due to their formation of copper-flavonoid complexes. Thus, to investigate the underlying inhibition mechanism, a large group of flavonoids from several major flavones and flavonols were tested using fluorescence quenching spectroscopy. In addition, large differences in the tyrosina...

Förster Resonance Energy Transfer and Fluorescence Quenching Based Low-density Lipoprotein Probes for Visualizing Transcytosis

Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes.

An important consideration in the design of oligonucleotide probes for homogeneous hybridization assays is the efficiency of energy transfer between the fluorophore and quencher used to label the probes. We have determined the efficiency of energy transfer for a large number of combinations of commonly used fluorophores and quenchers. We have also measured the quenching effect of nucleotides on...

Chlorophyll fluorescence quenching by xanthophylls

The interactions of the xanthophylls zeaxanthin, antheraxanthin and violaxanthin with chlorophyll, which are relevant for the chlorophyll fluorescence quenching in the non-photochemical quenching (NPQ) process in green plants, are investigated by means of quantum chemical methods. In particular, we use a hybrid approach consisting of time-dependent density-functional theory (TDDFT) and configur...